Last updated on 2022-09-11 12:56:16 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.0.2 | 38.18 | 393.71 | 431.89 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.0.2 | 32.66 | 283.58 | 316.24 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.0.2 | 552.78 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.0.2 | 557.13 | OK | |||
| r-devel-windows-x86_64 | 2.0.2 | 56.00 | 645.00 | 701.00 | OK | |
| r-patched-linux-x86_64 | 2.0.2 | 32.61 | 369.63 | 402.24 | OK | |
| r-release-linux-x86_64 | 2.0.2 | 36.80 | 376.65 | 413.45 | OK | |
| r-release-macos-arm64 | 2.0.2 | 197.00 | OK | |||
| r-release-macos-x86_64 | 2.0.2 | 325.00 | OK | |||
| r-release-windows-x86_64 | 2.0.2 | 49.00 | 627.00 | 676.00 | OK | |
| r-oldrel-macos-arm64 | 2.0.2 | 141.00 | OK | |||
| r-oldrel-macos-x86_64 | 2.0.2 | 262.00 | OK | |||
| r-oldrel-windows-ix86+x86_64 | 2.0.2 | 88.00 | 416.00 | 504.00 | WARN |
Version: 2.0.2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building 'dynamAedes_tutorial.Rmd' using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 2.4-0
Loading required package: spatstat.random
spatstat.random 2.2-0
Loading required package: spatstat.core
Loading required package: nlme
Loading required package: rpart
spatstat.core 2.4-4
Loading required package: spatstat.linnet
spatstat.linnet 2.3-2
spatstat 2.3-4 (nickname: 'Watch this space')
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.core':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
-- Attaching packages --------------------------------------- tidyverse 1.3.2 --
v ggplot2 3.3.6 v purrr 0.3.4
v tibble 3.1.8 v dplyr 1.0.9
v tidyr 1.2.0 v stringr 1.4.1
v readr 2.1.2 v forcats 0.5.2
-- Conflicts ------------------------------------------ tidyverse_conflicts() --
x dplyr::collapse() masks nlme::collapse()
x dplyr::filter() masks stats::filter()
x dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.9.1-CAPI-1.14.2
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-0
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
### Model without dispersal ###
starting worker pid=23088 on localhost:11624 at 10:31:47.577
##########################################
## Life cycle iterations have begun... ##
##########################################
Loading required package: dynamAedes
Loading required package: raster
Loading required package: sp
loaded dynamAedes and set parent environment
|
|%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%| 100%
########################################
## Iterations concluded. ##
########################################
There were 50 or more warnings (use warnings() to see the first 50)
Quitting from lines 275-281 (dynamAedes_tutorial.Rmd)
Error: processing vignette 'dynamAedes_tutorial.Rmd' failed with diagnostics:
PROJ4 argument-value pairs must begin with +: PROJCRS["unknown",
BASEGEOGCRS["unknown",
DATUM["World Geodetic System 1984",
ELLIPSOID["WGS 84",6378137,298.257223563,
LENGTHUNIT["metre",1]],
ID["EPSG",6326]],
PRIMEM["Greenwich",0,
ANGLEUNIT["degree",0.0174532925199433],
ID["EPSG",8901]]],
CONVERSION["UTM zone 1N",
METHOD["Transverse Mercator",
ID["EPSG",9807]],
PARAMETER["Latitude of natural origin",0,
ID["EPSG",8801]],
PARAMETER["Longitude origin",-177,
ID["EPSG",8802]],
PARAMETER["Scale factor at origin",0.9996,
SCALEUNIT["unity",1],
ID["EPSG",8805]],
PARAMETER["False easting",500000,
LENGTHUNIT["metre",1],
ID["EPSG",8806]],
northing",0,
ID["EPSG",8807]],
ID["EPSG",16001]],
CS[Cartesian,2],
AXIS["(E)",east,
ORDER[1],
LENGTHUNIT["metre",1,
ID["EPSG",9001]]],
AXIS["(N)",north,
ORDER[2],
ID["EPSG",9001]]]]
--- failed re-building 'dynamAedes_tutorial.Rmd'
SUMMARY: processing the following file failed:
'dynamAedes_tutorial.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64