To cite the Patterns package in publications use:

Bertrand F, Maumy-Bertrand M (2021). Patterns: reverse engineering of biological networks with patterned expressions. R package version 1.3.

Bertrand F, Maumy-Bertrand M (2020). “Patterns: reverse engineering of biological networks with patterned expressions.” Bioinformatics. https://doi.org/10.1093/bioinformatics/btaa855.

Corresponding BibTeX entries:

  @Manual{,
    title = {Patterns: reverse engineering of biological networks with
      patterned expressions},
    author = {F. Bertrand and M. Maumy-Bertrand},
    publisher = {manual},
    year = {2021},
    note = {R package version 1.3},
  }

  @Article{,
    title = {Patterns: reverse engineering of biological networks with
      patterned expressions},
    author = {Frederic Bertrand and Myriam Maumy-Bertrand},
    year = {2020},
    journal = {Bioinformatics},
    url = {https://doi.org/10.1093/bioinformatics/btaa855},
  }