RNAseqQC: Quality Control for RNA-Seq Data
Functions for semi-automated quality control of bulk RNA-seq data.
| Version: | 0.1.4 |
| Depends: | R (≥ 4.0) |
| Imports: | AnnotationHub, AnnotationFilter, ensembldb, circlize, DESeq2, SummarizedExperiment, vsn, ComplexHeatmap, matrixStats, grid, ggpointdensity, ggrepel, gghighlight, ggplot2, ggsci, cowplot, patchwork, purrr, dplyr, stringr, tidyr, tibble, RColorBrewer, tidyselect, magrittr |
| Suggests: | rmarkdown, knitr, recount3, apeglm |
| Published: | 2022-06-15 |
| Author: | Frederik Ziebell 
[aut, cre],
GlaxoSmithKline Research & Development Limited [cph] (GlaxoSmithKline
Research & Development Limited; registered address: 980 Great West
Road, Brentford, Middlesex TW8 9GS, United Kingdom) |
| Maintainer: | Frederik Ziebell <frederik.x.ziebell at gsk.com> |
| License: | Apache License (≥ 2) |
| NeedsCompilation: | no |
| Materials: | README NEWS |
| CRAN checks: | RNAseqQC results |
Documentation:
| Reference manual: | RNAseqQC.pdf |
| Vignettes: |
Creating The Example Data Set RNA-seq Quality Control |
Downloads:
| Package source: | RNAseqQC_0.1.4.tar.gz |
| Windows binaries: | r-devel: RNAseqQC_0.1.4.zip, r-release: RNAseqQC_0.1.4.zip, r-oldrel: RNAseqQC_0.1.2.zip |
| macOS binaries: | r-release (arm64): RNAseqQC_0.1.4.tgz, r-oldrel (arm64): RNAseqQC_0.1.2.tgz, r-release (x86_64): RNAseqQC_0.1.4.tgz, r-oldrel (x86_64): not available |
| Old sources: | RNAseqQC archive |
Linking:
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