Functions for phylogenetic analysis (Castiglione et al., 2018 <doi:10.1111/2041-210X.12954>). The functions perform the estimation of phenotypic evolutionary rates, identification of phenotypic evolutionary rate shifts, quantification of direction and size of evolutionary change in multivariate traits, the computation of ontogenetic shape vectors and test for morphological convergence.
| Version: | 2.7.0 |
| Depends: | R (≥ 3.6.0), emmeans (≥ 1.4.3) |
| Imports: | ape, phytools, stats4, foreach, doParallel, parallel |
| Suggests: | phangorn, rlist, scales, R.utils, cluster, RColorBrewer, nlme, car, smatr, picante, vegan, ddpcr, geomorph, rmarkdown, knitr, kableExtra, plotrix, pdftools, rgl, mvMORPH, ggplot2, qpdf, inflection, Rvcg, Morpho, evolqg, manipulate, markdown, Rphylopars, phylolm, webshot2 |
| Published: | 2022-08-29 |
| Author: | Pasquale Raia, Silvia Castiglione, Carmela Serio, Alessandro Mondanaro, Marina Melchionna, Mirko Di Febbraro, Antonio Profico, Francesco Carotenuto |
| Maintainer: | Pasquale Raia <pasquale.raia at unina.it> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| Citation: | RRphylo citation info |
| Materials: | README |
| CRAN checks: | RRphylo results |
| Reference manual: | RRphylo.pdf |
| Vignettes: |
Plotting-tools RRphylo Tree-Manipulation overfitRR search.conv search.shift search.trend swapONE |
| Package source: | RRphylo_2.7.0.tar.gz |
| Windows binaries: | r-devel: RRphylo_2.7.0.zip, r-release: RRphylo_2.7.0.zip, r-oldrel: RRphylo_2.7.0.zip |
| macOS binaries: | r-release (arm64): RRphylo_2.7.0.tgz, r-oldrel (arm64): RRphylo_2.7.0.tgz, r-release (x86_64): RRphylo_2.7.0.tgz, r-oldrel (x86_64): RRphylo_2.7.0.tgz |
| Old sources: | RRphylo archive |
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