RcmdrPlugin.KMggplot2 package

Changes in version 0.2-6 (2019-09-17)

• Fixed a bug: Rd files.
• New ggthemes’s themes (theme_clean, theme_economist_white, theme_excel_new, theme_solarized_2).

Changes in version 0.2-5 (2018-02-20)

• Fixed a bug: The size of dots in Beeswarm plots (Thanks to Prof. José G. Conde).
• Fixed a bug: A namespace problem in r-devel-linux-x86_64-fedora-clang/gcc.

Changes in version 0.2-4 (2016-12-20)

• ggplot2 2.2.0 was supported.
• Added ggplot2’s colour/fill scales (scale_hue, scale_grey).
• New plot: Beeswarm plot in Box plot (Thanks to DailyFunky @EpiFunky).
• New function: lastcom() function to list the last command.
• Fixed a bug: Histogram with missing values (Thanks to Dr. José G. Conde).
• Fixed a bug: Boxplot with an inappropriate jitter position (Thanks to Dr. M. Felix Freshwater).

Changes in version 0.2-3 (2015-12-30)

• New geom_stepribbon.
• Pointwise confidence intervals of Kaplan-Meier plots with band (Thanks to Dr. M. Felix Freshwater).
• Notched box plots (Thanks to Dr. M. Felix Freshwater).
• Stratified (colored) box plots (Thanks to Dr. M. Felix Freshwater).

Changes in version 0.2-2 (2015-12-22)

• New ggplot2’s theme (theme_linedraw, theme_light).
• New ggthemes’s themes (theme_base, theme_par).
• Fixed a bug was caused by new ggplot2’s theme.
• Fixed a bug related to ggthemes 3.0.0.
• Fixed a bug related to windows fonts.
• Fixed a bug related to file saving.
• Added a vignette for dataset requirements to make Kaplan-Meier plot.
• Added a vignette for extrafont.

Changes in version 0.2-1 (2015-12-14)

• Kaplan-Meier plot: fixed a bug was caused by tie data handling (Thanks to Dr. M. Felix Freshwater).
• Slovenian translation by Matjaž Jeran (Thanks to Matjaž Jeran and their friends).
• New ggplot2’s theme (theme_dark).
• New ggthemes’s themes (theme_calc, theme_fivethirtyeight, theme_gdocs, theme_hc, theme_pander).
• Preview button (Thanks to Prof. Erich Neuwirth).
• GUI refinement (Thanks to Prof. Erich Neuwirth).

Changes in version 0.2-0 (2013-01-23)

• Fixed a bug about “modes” in “variableboxes” class.
• Added ggplot2-0.9.3’s themes (classic, minimal).
• Added ggthemes’s themes (tufte, economist, solarized, stata, excel, igray, few, wsj).
• Kaplan-Meier plot: added a option to show a p-value of the log-rank test (Thanks to Sharma Vivek).
• Kaplan-Meier plot: added a option to draw a line at median survival (Thanks to Sharma Vivek).
• Scatter plot matrix: fixed bugs and reimplemented, because the ggplot2::plotmatrix() is deprecated.
• Scatter plot matrix: added stratified plots.
• Modified start-up for the problem that Commander window open twice when a plug-in is loaded via library() (see Rcmdr 1.9-3 NEWS).

Changes in version 0.1-1 (2012-09-03)

• Renamed opt() to theme() and theme_xx() and element_xx() for the new theme system.
• Deleted a theme element: theme_rect2().
• Box plot: added a symbol of the median for violin plots.

Changes in version 0.1-0 (2012-05-18)

• Restructuring implementation approach for efficient maintenance.
• Added options() for storing package specific options (e.g., font size, font family, …).
• Added a theme: theme_simple().
• Added a theme element: theme_rect2().
• Added a list box for facet_xx() functions in some menus (Thanks to Prof. Murtaza Haider).
• Kaplan-Meier plot: added confidence intervals.
• Box plot: added violin plots.
• Bar chart for discrete variables: deleted dynamite plots.
• Bar chart for discrete variables: added stacked bar charts.
• Scatter plot matrix: added univariate plots at diagonal positions (ggplot2::plotmatrix).
• Deleted the dummy data for histograms, which is large in size.

Changes in version 0.0-4 (2012-05-01)

• Fixed “scale_y_continuous(formatter =”percent“)” to “scale_y_continuous(labels = percent)” for ggplot2 (>= 0.9.0).
• Fixed “legend = FALSE” to “show_guide = FALSE” for ggplot2 (>= 0.9.0).
• Fixed the DESCRIPTION file for ggplot2 (>= 0.9.0) dependency.

Changes in version 0.0-3 (2011-07-28; FIRST RELEASE VERSION)

• Kaplan-Meier plot: Show no. at risk table on outside.
• Histogram: Color coding.
• Histogram: Density estimation.
• Q-Q plot: Create plots based on a maximum likelihood estimate for the parameters of the selected theoretical distribution.
• Q-Q plot: Create plots based on a user-specified theoretical distribution.
• Box plot / Errorbar plot: Box plot.
• Box plot / Errorbar plot: Mean plus/minus S.D.
• Box plot / Errorbar plot: Mean plus/minus S.D. (Bar plot).
• Box plot / Errorbar plot: 95 percent Confidence interval (t distribution).
• Box plot / Errorbar plot: 95 percent Confidence interval (bootstrap).
• Scatter plot: Fitting a linear regression.
• Scatter plot: Smoothing with LOESS for small datasets or GAM with a cubic regression basis for large data.
• Scatter plot matrix: Fitting a linear regression.
• Scatter plot matrix: Smoothing with LOESS for small datasets or GAM with a cubic regression basis for large data.
• Line chart: Normal line chart.
• Line chart: Line char with a step function.
• Line chart: Area plot.
• Pie chart: Pie chart.
• Bar chart for discrete variables: Bar chart for discrete variables.
• Contour plot: Color coding.
• Contour plot: Heat map.
• Distribution plot: Normal distribution.
• Distribution plot: t distribution.
• Distribution plot: Chi-square distribution.
• Distribution plot: F distribution.
• Distribution plot: Exponential distribution.
• Distribution plot: Uniform distribution.
• Distribution plot: Beta distribution.
• Distribution plot: Cauchy distribution.
• Distribution plot: Logistic distribution.
• Distribution plot: Log-normal distribution.
• Distribution plot: Gamma distribution.
• Distribution plot: Weibull distribution.
• Distribution plot: Binomial distribution.
• Distribution plot: Poisson distribution.
• Distribution plot: Geometric distribution.
• Distribution plot: Hypergeometric distribution.
• Distribution plot: Negative binomial distribution.

Changes in version 0.0-2 (2010-11-01; ALPHA TEST VERSION)

• Kaplan-Meier plot: Show no. at risk on inside.

Changes in version 0.0-1 (2010-XX-XX; UNRELEASED VERSION)

• Kaplan-Meier plot: Usual Kaplan-Meier plot.