Creates visualizations of intersecting sets using a novel matrix design, along with visualizations of several common set, element and attribute related tasks (Conway 2017) <doi:10.1093/bioinformatics/btx364>.
Version: | 1.4.0 |
Depends: | R (≥ 3.0) |
Imports: | ggplot2, gridExtra, plyr, utils, stats, methods, grDevices, scales |
Suggests: | knitr |
Published: | 2019-05-22 |
Author: | Jake Conway [cre], Nils Gehlenborg [aut] |
Maintainer: | Jake Conway <jake_conway at hms.harvard.edu> |
BugReports: | http://github.com/hms-dbmi/UpSetR/issues |
License: | MIT + file LICENSE |
URL: | http://github.com/hms-dbmi/UpSetR |
NeedsCompilation: | no |
Materials: | README NEWS |
CRAN checks: | UpSetR results |
Reference manual: | UpSetR.pdf |
Vignettes: |
Attribute Plots Basic Usage Querying the Data Incorporating Set Metadata |
Package source: | UpSetR_1.4.0.tar.gz |
Windows binaries: | r-devel: UpSetR_1.4.0.zip, r-release: UpSetR_1.4.0.zip, r-oldrel: UpSetR_1.4.0.zip |
macOS binaries: | r-release (arm64): UpSetR_1.4.0.tgz, r-oldrel (arm64): UpSetR_1.4.0.tgz, r-release (x86_64): UpSetR_1.4.0.tgz, r-oldrel (x86_64): UpSetR_1.4.0.tgz |
Old sources: | UpSetR archive |
Reverse depends: | SummarizedBenchmark |
Reverse imports: | artMS, ASpli, bulkAnalyseR, cRegulome, DiscoRhythm, EpiCompare, iCOBRA, ideal, immunarch, Inflect, ivygapSE, LymphoSeq, MAGAR, MatrixQCvis, mpwR, naniar, plinkQC, PTXQC, pulsedSilac, QCAcluster, rimu, seqsetvis, spatialHeatmap, SubgrPlots, VennDetail, ViSEAGO |
Reverse suggests: | Cepo, ChIPpeakAnno, distinct, HMP2Data, MetaNeighbor, miceFast, MultiAssayExperiment, MungeSumstats, muscat, OmicNavigator, SingleCellMultiModal, systemPipeShiny, TFutils, TimeSeriesExperiment |
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