adaptiveGPCA: Adaptive Generalized PCA

Implements adaptive gPCA, as described in: Fukuyama, J. (2017) <arXiv:1702.00501>. The package also includes functionality for applying the method to 'phyloseq' objects so that the method can be easily applied to microbiome data and a 'shiny' app for interactive visualization.

Version:	0.1.2
Depends:	R (≥ 3.1.0)
Imports:	ape (≥ 3.1.4), ggplot2 (≥ 1.0.0), shiny (≥ 1.0.0), phyloseq (≥ 1.14.0)
Suggests:	knitr, rmarkdown
Published:	2018-03-14
Author:	Julia Fukuyama [aut, cre]
Maintainer:	Julia Fukuyama <julia.fukuyama at gmail.com>
License:	AGPL-3
NeedsCompilation:	no
CRAN checks:	adaptiveGPCA results

Documentation:

Reference manual:	adaptiveGPCA.pdf
Vignettes:	adaptvieGPCA vignette

Downloads:

Package source:	adaptiveGPCA_0.1.2.tar.gz
Windows binaries:	r-devel: adaptiveGPCA_0.1.2.zip, r-release: adaptiveGPCA_0.1.2.zip, r-oldrel: adaptiveGPCA_0.1.2.zip
macOS binaries:	r-release (arm64): adaptiveGPCA_0.1.2.tgz, r-oldrel (arm64): adaptiveGPCA_0.1.2.tgz, r-release (x86_64): adaptiveGPCA_0.1.2.tgz, r-oldrel (x86_64): adaptiveGPCA_0.1.2.tgz
Old sources:	adaptiveGPCA archive

Reverse dependencies:

Reverse suggests:

treeDA

Linking:

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