biogram: N-Gram Analysis of Biological Sequences
Tools for extraction and analysis of various
n-grams (k-mers) derived from biological sequences (proteins
or nucleic acids). Contains QuiPT (quick permutation test) for fast
feature-filtering of the n-gram data.
Version: |
1.6.3 |
Depends: |
R (≥ 3.0.0), slam |
Imports: |
combinat, entropy, partitions |
Suggests: |
ggplot2, knitr, testthat |
Published: |
2020-03-31 |
Author: |
Michal Burdukiewicz
[cre, aut],
Piotr Sobczyk [aut],
Chris Lauber [aut],
Dominik Rafacz [aut],
Katarzyna Sidorczuk
[ctb] |
Maintainer: |
Michal Burdukiewicz <michalburdukiewicz at gmail.com> |
BugReports: |
https://github.com/michbur/biogram/issues |
License: |
GPL-3 |
URL: |
https://github.com/michbur/biogram |
NeedsCompilation: |
no |
Citation: |
biogram citation info |
Materials: |
README ChangeLog |
CRAN checks: |
biogram results |
Documentation:
Downloads:
Reverse dependencies:
Linking:
Please use the canonical form
https://CRAN.R-project.org/package=biogram
to link to this page.