Please cite 'calmate' and use of the CalMaTe method using the following reference:
Ortiz-Estevez, Maria, Aramburu, Ander, Bengtsson, Henrik, Neuvial, Pierre, Rubio, Angel (2012). “CalMaTe: A method and software to improve allele-specific copy number of SNP arrays for downstream segmentation.” Bioinformatics, 28(13), 1793–1794. doi: 10.1093/bioinformatics/bts248.
Corresponding BibTeX entry:
@Article{OrtizEstevez2012, author = {{Ortiz-Estevez} and {Maria} and {Aramburu} and {Ander} and {Bengtsson} and {Henrik} and {Neuvial} and {Pierre} and {Rubio} and {Angel}}, journal = {Bioinformatics}, title = {CalMaTe: A method and software to improve allele-specific copy number of SNP arrays for downstream segmentation}, year = {2012}, number = {13}, pages = {1793--1794}, volume = {28}, publisher = {Oxford University Press}, doi = {10.1093/bioinformatics/bts248}, }