Releases will be numbered with the following semantic versioning format:
<major>.<minor>.<patch>
And constructed with the following guidelines:
Breaking backward compatibility bumps the major (and resets the minor and patch)
New additions without breaking backward compatibility bumps the minor (and resets the patch)
Bug fixes and misc changes bumps the patch
dynamic_artefacts setting to the
dilations function and documentation. Used to dynamically
assess artefacts. Also renamed artefacts to
static_artefacts.resting_delay setting to the
dilations function and documentation. Used to assess delay
the subsequent period for assessment.dilations function and documentation. Used to
assess dilations from PLR3000.sRCT function and documentation. Now applies
random effect of site, and add relative risks together using ln-number
instead of absolute numbersclinmon documentationrrGcompclinmon documentationPLR3000Added the sRCT-function to generate simulated
randomized clinical trials. Much more work to add
Added the rrGcomp-function to calculate relative
risk using G-computation from an individual participant
dataframe.
Added the PLR3000-function to convert data extracted
from NeurOptics PLR-3000 to a long format dataframe.
iscus-function to convert XML microdialysis
data to a dataframe.TFA and clinmon
functions, especially the overlapping functionality did not produce Mx,
PRx or CPPopt.Changed name from clinmon to clintools to allow for inclusion of other function than only hemodynamic indices.
Based on the matlab-script created by David Simpsons in 2015 the
TFA-function have been added to calculate the transfer
function analysis.
The test data from 2015 has also been addedd
data(tfa_sample_data), data(tfa_sample_data1),
and data(tfa_sample_data2) to underline the script
generates the same results as the Matlab-script.
Added the ortable-function which generates an Odds
ratio table from a logistic regression glm.
Simplified the package, to calculate all the indices in
clinmon(). clinmon() uses a
continuous recording and returns a dataframe with hemodynamic
indices for every period, epoch or block depending on the chosen output.
Includes COest, CPPopt, CVRi,
Dx, Mx, PI, PRx,
PWA, RI, and Sx (see
details).
Test data set is added to the package in two resolutions 1000 Hz, and 10 Hz. The corresponding deleter-file is also added.
This is the first version of the package put on CRAN
Correlation coefficient based indices Dx,
Sx, Mx and PRx are functional,
and validated through ICM+
Furthermore indices such as CVRi, PI,
RI, PWA, and CO are
functional.
CPPopt and TFA will be added in future
versions