europepmc 0.4.1

• Implement API version 6.6 support

Minor changes:

• Allow full-text retrieval only by PMCID, thanks @ESPoppelaars
• Bug fix: epmc_search() limit can now be larger than the expected number of results

europepmc 0.4

• Support API version 6.3
• Europe PMC Annotations ID integration

New functionalities:

• epmc_annotations_by_id() get text-mined concepts and full-texts from Europe PMC indexed full-texts; epmc_tm()and epmc_tm_count() deprecated, use epmc_annotations_by_id() instead
• epmc_search_by_doi() get PubMed metadata by DOI names

Minor changes:

• improved retry in case API call fails accidentially
• preprint records collection added
• retrieve full-text by PMID
• improved long-form documentation
• improved testing
• new official docs site
• use tibble instead of deprecated data_frame functions

europepmc 0.3

• Implement API version 6.0

Minor changes

• improved feedback when calling the API
• link to most current paper from the Europe PMC team

europepmc 0.2

• Move to HTTPS
• new epmc_hits_trends() function to obtain data for review graphs (thanks @maelle)
• new vignette “Making proper trend graphs” and updated search documentation

Minor changes

• fix sort param
• rename jsonlite::rbind_pages() function
• improve europepmc::epmc_tm() output

europepmc 0.1.4

• fixed example in vignette which lead to warnings
• synonym search is operational again

europepmc 0.1.3

Minor changes

• removed explicit API versioning, so that the client now always supports the most recent API version #13
• set user agent to “ropensci/europepmc”
• epmc_db(), epmc_db_count(): add PRIDE archive as external database

europepmc 0.1.2

• cache HTTP 500 errors which sometimes occur and re-try up to five times. It is based on googlesheet’s approach
• new function epmc_profile() to get an overview of hit counts for several databases or publication types
• update imported packages in DESCRIPTION

europepmc 0.1.1

Implement RESTful API v4.5.3

Major changes

• epmc_search(): implement cursorMark to paginate through results
• epmc_search(): added sort parameter
• epmc_search(): support of raw output file #7

Minor changes

• epmc_search() and other functions return non-nested data.frames as tibbles to better support the tidyverse
• epmc_search() improve error handling when nothing was found
• epmc_details() [added MeSH qualifer #8]((https://github.com/ropensci/europepmc/issues/8)
• remove NBKas data source forepmc_details(), use PMIDs (MED`) instead
• fix warnings regarding vignettes and imported dependencies reported by CRAN

europepmc 0.1

Initial submission to CRAN

Major changes

Support of the following Europe PMC RESTful API methods:

• search
• citations
• references
• databaseLinks
• labsLinks
• textMinedTerms
• fullTextXML
• bookXML

Changes made during the ropensci onboarding review by @toph-allen https://github.com/ropensci/software-review/issues/29

Answering to @cstubben reports and suggestions:

• search returns data.frame of lists #1
• removed hit_count from epmc_search results #4
• set default batch_size to 1000 and limit to 25? #5