ipmr: Integral Projection Models
Flexibly implements Integral Projection Models using a mathematical(ish) syntax. This package will not help with the vital rate modeling process, but will help convert those regression models into an IPM. 'ipmr' handles density dependence and environmental stochasticity, with a couple of options for implementing the latter. In addition, provides functions to avoid unintentional eviction of individuals from models. Additionally, provides model diagnostic tools, plotting functionality, stochastic/deterministic simulations, and analysis tools. Integral projection models are described in depth by Easterling et al. (2000) <doi:10.1890/0012-9658(2000)081[0694:SSSAAN]2.0.CO;2>, Merow et al. (2013) <doi:10.1111/2041-210X.12146>, Rees et al. (2014) <doi:10.1111/1365-2656.12178>, and Metcalf et al. (2015) <doi:10.1111/2041-210X.12405>. Williams et al. (2012) <doi:10.1890/11-2147.1> discuss the problem of unintentional eviction.
| Version: | 0.0.5 |
| Depends: | R (≥ 3.4) |
| Imports: | graphics, grDevices, magrittr, methods, purrr (≥ 0.3.0), rlang (≥ 0.3.0), stats, utils, Rcpp |
| LinkingTo: | Rcpp |
| Suggests: | covr, knitr, lme4, mvtnorm, rmarkdown, roxygen2, spelling, testthat, tools |
| Published: | 2022-04-28 |
| Author: | Sam Levin  [aut,
cre],
Aldo Compagnoni [aut],
Dylan Childs [aut],
Sanne Evers [aut],
Roberto Salguero-Gomez [aut],
Tiffany Knight [aut],
Eric Scott [ctb] |
| Maintainer: | Sam Levin <levisc8 at gmail.com> |
| BugReports: | https://github.com/levisc8/ipmr/issues |
| License: | MIT + file LICENSE |
| URL: | https://levisc8.github.io/ipmr/, https://github.com/levisc8/ipmr |
| NeedsCompilation: | yes |
| Language: | en-US |
| Citation: | ipmr citation info |
| Materials: | NEWS |
| CRAN checks: | ipmr results |
Documentation:
| Reference manual: | ipmr.pdf |
| Vignettes: |
Age-Size IPMs Density Dependent IPMs General IPMs Index Notation in ipmr Introduction to ipmr proto_ipm Data Structure |
Downloads:
| Package source: | ipmr_0.0.5.tar.gz |
| Windows binaries: | r-devel: ipmr_0.0.5.zip, r-release: ipmr_0.0.5.zip, r-oldrel: ipmr_0.0.5.zip |
| macOS binaries: | r-release (arm64): ipmr_0.0.5.tgz, r-oldrel (arm64): ipmr_0.0.5.tgz, r-release (x86_64): ipmr_0.0.5.tgz, r-oldrel (x86_64): ipmr_0.0.5.tgz |
| Old sources: | ipmr archive |
Reverse dependencies:
| Reverse depends: | Rpadrino |
Linking:
Please use the canonical form https://CRAN.R-project.org/package=ipmr to link to this page.