pedigreeTools: Versatile Functions for Working with Pedigrees

Tools to sort, edit and prune pedigrees and to extract the inbreeding coefficients and the relationship matrix (includes code for pedigrees from self-pollinated species). The use of pedigree data is central to genetics research within the animal and plant breeding communities to predict breeding values. The relationship matrix between the individuals can be derived from pedigree structure following the algorithms described for example in Vazquez et al., 2010 <doi:10.2527/jas.2009-1952>.

Version:	0.1
Depends:	R (≥ 3.0.0), methods
Imports:	Matrix (≥ 1.0)
Published:	2018-12-09
Author:	Ana Ines Vazquez, Douglas Bates, Siddharth Avadhanam, Paulino Perez
Maintainer:	Ana Ines Vazquez <avazquez at msu.edu>
License:	GPL-3
URL:	https://github.com/Rpedigree/pedigreeTools/
NeedsCompilation:	yes
Materials:	README
CRAN checks:	pedigreeTools results

Documentation:

Reference manual:

pedigreeTools.pdf

Downloads:

Package source:	pedigreeTools_0.1.tar.gz
Windows binaries:	r-devel: pedigreeTools_0.1.zip, r-release: pedigreeTools_0.1.zip, r-oldrel: pedigreeTools_0.1.zip
macOS binaries:	r-release (arm64): pedigreeTools_0.1.tgz, r-oldrel (arm64): pedigreeTools_0.1.tgz, r-release (x86_64): pedigreeTools_0.1.tgz, r-oldrel (x86_64): pedigreeTools_0.1.tgz

Linking:

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