Identifies potential target sequences for a given set of primers and generates phylogenetic trees annotated with the taxonomies of the predicted amplification products.
Version: | 1.0.6 |
Depends: | R (≥ 3.5.0), directlabels, gridExtra |
Imports: | ape, foreach, ggplot2, grid, httr, lubridate, plyr, reshape2, scales, stringr, XML |
Published: | 2022-04-05 |
Author: | Jim Hester [aut], Matt Cannon [aut, cre] |
Maintainer: | Matt Cannon <matthewvc1 at gmail.com> |
License: | GPL-2 |
NeedsCompilation: | yes |
CRAN checks: | primerTree results |
Reference manual: | primerTree.pdf |
Package source: | primerTree_1.0.6.tar.gz |
Windows binaries: | r-devel: primerTree_1.0.6.zip, r-release: primerTree_1.0.6.zip, r-oldrel: primerTree_1.0.6.zip |
macOS binaries: | r-release (arm64): primerTree_1.0.6.tgz, r-oldrel (arm64): primerTree_1.0.6.tgz, r-release (x86_64): primerTree_1.0.6.tgz, r-oldrel (x86_64): primerTree_1.0.6.tgz |
Old sources: | primerTree archive |
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